All Categories - My Computational Genomic Playground

All Categories

Machine Learning

Markov Chain Mento Carlo (MCMC) 2

Probabilistic Graphical Model

Canonical Correlation Analysis (CCA)

Complex number for biologist

Fourier transform for biologist

Machine Learning with Graphs

Graph: Train, valid, and test dataset split for link prediction

Graph: Mini-batch sampling in large-scale graphs

Graph: Implement a MessagePassing layer in Pytorch Geometric

Graph: Concepts

Graph: GraphRNN

Coding

Rust: Advanced Trait

C++ Notes: CUDA

C++ Notes: Concurrency

Pointer in UnSafe Swift

Swift Cheat Sheet

Make bioinfo uncool again

Convert Seurat to Scanpy h5ad

Deploy IGV webapp on linux server

Deploy snakemake pipeline on HPC

GATK for inbred mouse

Cheatsheet for command line

Algorithm and data structure

Priority Queque

Statistic

Bayesian Data Analysis: Basics

Survival Analysis

Power, Effect size, Sample size

Quantile normalization

Nature Language Processing

RoPE: Rotary Positional Embeddings

NLP: Parse trees

NLP: RNN and Transformers